Biotechnology
Biotechnology is experiencing a rapid acceleration thanks to the advances in omic techniques and computing capacities, which allow us to better understand how we can put nature’s machinery to use for the good of humanity. Biotechnology is a broad discipline in which biological processes, cells or organisms are exploited to develop new technologies, with applications in agri- and aquaculture, food production, industrial processes and medicine.
Because of this wide range of applications, biotechnology is usually color-coded to refer to its four main fields of application. Industrial biotechnology is usually referred to as white biotechnology, while red is reserved for medical applications, green for agriculture-related developments, and blue for processes that encompass the aquatic environment.
The interdisciplinary nature of the IIM-CSIC allows us to collaborate with different industries for the application of biotechnological innovations across the whole color range of biotechnology.
You can read about all our capabilities and associated services below.
Capabilities
- Software | GenSSI: toolbox for structural identifiability analysis of biological models
GenSSI is a toolbox that requires MATLAB and Symbolic Math Toolbox. It offers a technique for studying structural identifiability using iterative Lie derivatives and identifiability tableaus.
More information here,
- Software | SensSB: toolbox for the development and Sensitivity analysis of Systems Biology models
Authors: M. Rodríguez-Fernández and J. R. Banga
Description: SensSB is an easy-to-use Matlab®-based sensitivity analysis software toolbox. This tool integrates a variety of local and global sensitivity methods that can be applied to biological models described by ordinary differential equations (ODEs) or differential algebraic equations (DAEs). SensSB is also able to import models in the Systems Biology Mark-up Language (SBML) format.
Available here upon request.
- Software | GLOBALm: a clustering method for constrained global optimization problems in Matlab
Method described in Csendes, T., L. Pal, J.O.H. Sendin, J.R. Banga (2008) The GLOBAL Optimization Method Revisited. Optimization Letters, 2(4):445-454.
Software available upon request (email us if interested).
- Software | MITS: a Tabu search-based algorithm for mixed-integer nonlinear problems (MINLPs)
Method described in: Exler, O., L.T. Antelo, J.A. Egea, A.A. Alonso and J.R. Banga (2008) A Tabu search-based algorithm for mixed-integer nonlinear problems and its application to integrated process and control system design. Computers & Chemical Engineering, 32(8):1877-1891.
Software available upon request (email us if interested).
- Software | ACOmi: Ant Colony Optimization for mixed integer nonlinear programming problems (MINLPs)
The method is described in Schlater, M., J. A. Egea, J. R. Banga (2009) Extended ant colony optimization for non-convex mixed integer nonlinear programming. Computers & Operations Research 36(7): 2217-2229.
Software available upon request (email us if interested).
Active projects
- LIFE REFISH -
<p>Flexible biorefinery to valorise discards and by-products of the European fish and seafood production (REFISH)</p>
Principal investigator:VázquezÁlvarezXosé AntónFunding body:LIFE Environment (Nature & Circular Economy)Funding for IIM-CSIC:357637€Fromto - METDISHFISH -
<p>Terapias metabólicas para el tratamiento de enfermedades infecciosas en peces de cultivo</p>
Principal investigator:NovoaGarcíaBeatrizFunding body:Ayuda cofinanciada por el Fondo Europeo Marítimo y de Pesca y el Ministerio de Agricultura, Pesca y Alimentación.Funding for IIM-CSIC:324175€Fromto - PESCANDO 4.0 -
<p>Plataforma Blockchain e IoT para garantizar la trazabilidad, seguridad, calidad y sostenibilidad en la cadena de valor de los productos pesqueros</p>
Principal investigator:VilasFernándezCarlosFunding body:PROYECTO FINANCIADO POR EL PLAN DE RECUPERACIÓN, TRANSFORMACIÓN Y RESILIENCIA Y LOS FONDOS EUROPEOS NEXT GENERATION EU EN EL MARCO DEL REAL DECRETO 685/2021 DEL 3 DE AGOSTOFunding for IIM-CSIC:145812€Fromto - BIOTRANSFER -
<p>Polymicrobial L. monocytogenes-carrying biofilms as a key on the risk of listeriosis in foods</p>
Principal investigator:LópezCaboMartaFunding body:CSICFunding for IIM-CSIC:28557€Fromto - VALOR -
<p>Valorización integral de los efluentes y residuos de pieles generados en el proceso de producción de gelatinas marinas de alta calidad</p>
Principal investigator:VázquezÁlvarezXosé AntónFunding body:CSICFunding for IIM-CSIC:21600€Fromto - DTWINE2021 -
<p>Digital Twins to optimize energy efficiency and product quality in WINEries</p>
Principal investigator:BalsaCantoEvaFunding body:Proyecto PLEC2021-007827 financiado por MCIN/ AEI /10.13039/501100011033 y por la Unión Europea NextGenerationEU/PRTRFunding for IIM-CSIC:248164€Fromto - SEAFOOD-ID -
<p>ANALYTICAL STRATEGIES BASED ON NON-DESTRUCTIVE METHODS AND METAGENOMICS FOR THE CONTROL OF PRODUCTION METHOD AND GEOGRAPHIC ORIGIN</p>
Principal investigator:GonzálezSoteloCarmenPérezMartínRicardo IsaacFunding body:Proyecto PID2020-118012RB-C21 financiado por MCIN/ AEI /10.13039/501100011033Funding for IIM-CSIC:168000€Fromto - IMANREFIVIR -
<p>IMMUNE ANTIVIRAL RESPONSE OF FISH AGAINST RNA VIRUSES</p>
Principal investigator:NovoaGarcíaBeatrizFunding body:Proyecto PID2020-119532RB-I00 financiado por MCIN/ AEI /10.13039/501100011033Funding for IIM-CSIC:160000€Fromto - Contrato Programa -
<p>AYUDA CONVENIO ENTRE CSIC Y LA AXENCIA GALEGA DE INNOVACIÓN -GAIN- PARA EL DESARROLLO DE PROGRAMAS DE I+D+i EN LOS INSTITUTOS DE INVESTIGACIÓN DEL CSIC EN GALICIA Y EN LOS CENTROS OCEANOGRÁFICOS DEL INSTITUTO ESPAÑOL DE OCEANOGRAFÍA (CSIC-IEO). 2021-2022</p>
Principal investigator:SaboridoReyFranFunding body:Agencia Galega de InnovaciónFunding for IIM-CSIC:521824€Fromto - ISEAS -
<p>Nanopartículas con hidrolizados de colágeno marino: aplicaciones en cosmética</p>
Principal investigator:PérezMartínRicardo IsaacFunding body:CSICFunding for IIM-CSIC:52000€Fromto